PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP040238.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 233aa    MW: 25964.4 Da    PI: 6.9258
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP040238.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY795.1e-25178218242
                  --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-S CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversa 42 
                  +Dgy+WrKYGqK vk+s+fprsYYrCtsa+C+vkk+vers 
  PCP040238.1 178 EDGYRWRKYGQKAVKNSPFPRSYYRCTSASCNVKKRVERSF 218
                  8**************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MNVKKDVVKR EDNINSNDMN GGGGGGGLTT SPFAGMFDFC EGEKSSSLGF MELLGVGVGQ  60
DYCPTSLFDY LPQTPSTVLP SLASTMGGKD QLSTDYSSLN QQPTTPNSSS ISSESSEAVN  120
EEHTDHKAAT DQEKNNEEEE HDEQQKTKKE LKAKKASRKR QREPRFAFMT KSEVDHLEDG  180
YRWRKYGQKA VKNSPFPRSY YRCTSASCNV KKRVERSFXX XXXXXXXQSI SAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47260.13e-38WRKY family protein