PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP040523.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 354aa    MW: 39567.2 Da    PI: 9.9218
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP040523.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.31.5e-12555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT+eE+  l+ +v ++G g W+tI +         +R+  ++k++w++
      PCP040523.1  5 KQKWTPEEESALKAGVIKHGAGKWRTILKDPEfsgvlYTRSNVDLKDKWRN 55
                     79************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MGAPKQKWTP EEESALKAGV IKHGAGKWRT ILKDPEFSGV LYTRSNVDLK DKWRNMSVMA  60
NGWGSREKAK TALRRMHPIS KQDENSMPFS TVVQSDDEMM DAKPISVSSE TQQISGPRKS  120
IFLRTNNSCA IQQVDLFVNV IHDILKGSDW LDNLIMEAIT RLKEPGGSNK TTIAAYIEDE  180
YWPPQDFKRL LSEKLKFLTA SRKLIKVKRR YRIAPTPALS EKRRNTSTYP FEGRQVASAF  240
EGRRMASPFE GRPLVSPFEG RYMASPKFDN DEATILMKAQ IDLELAKMRT MTPREATLAA  300
AQAVKEAEAA IAEAEEAARE AEAAEADAEA AQAFAEAAMK TLKGRNASKT VKFT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.13e-88MYB_related family protein