PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP040553.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 266aa    MW: 30459.7 Da    PI: 6.8793
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP040553.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding254.3e-084262346
                     -HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqk 46
                     +W+ Ia+ ++ gRt++++k++w++
      PCP040553.1  4 RWSVIAAQLP-GRTDNDIKNYWNT 26
                     4*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MRVRWSVIAA QLPGRTDNDI KNYWNTKLKK KLMGMHMGPP RPHNHHKNLL KPPPFPSSSH  60
HNYQNQPLIP SEPLSSPYKD LSNYNRSFFG FEVPVPLPPQ VSLTSNNFSN ISTNSSSSFF  120
QTLNYPAGVK KNNNINNLLV FGSEGSCSTS SDGSCNNQIS YDYCSRSEIN NIKQEEMGFD  180
HQSFMMLNYG NQWTERPNGF YFGSENNTVE FTDLDEDVKQ QLISTRSKIN YNNNNTIINE  240
SSKSNSLLFN VDESKTEDDE KVMYFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56110.12e-10MYB family protein