PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP041000.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 141aa    MW: 15490.5 Da    PI: 10.1984
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP041000.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP240.66.3e-1370118155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  s+ykGV   + +g W A+I++      ++r++lg+f  +++Aa+a++ a+++++g
  PCP041000.1  70 SKYKGVVPQP-NGCWGAQIYEK-----HQRVWLGTFNEEDKAARAYDIAAQRFRG 118
                  89****9888.8*********3.....5**********99*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    
MSPCPAYMMP GDTRGDDEEA GSPERIRKSR ESRKKKKKGS GASIVILDPQ LSSSSGTGGV  60
KAESRKLPSS KYKGVVPQPN GCWGAQIYEK HQRVWLGTFN EEDKAARAYD IAAQRFRGRN  120
VVTNFKPSSA EKLCLTAQLE N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25730.13e-40RAV family protein