PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP041305.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GRAS
Protein Properties Length: 115aa    MW: 12736.4 Da    PI: 6.7835
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP041305.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS51.42.1e-161996109
         GRAS   6 lecAeavssgdlelaqalLarlsel..aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                  +e+A+a+s+g+ e+a ++L+r++ +  a+p+ ++ qRl  ++  AL++r++     + +  p  e      +e++ +++ ++e+sP++++++++aN a
  PCP041305.1   1 MEAATAISDGKSEAAMEILTRMNSTqvANPRPSSEQRLLEFMGLALKSRVNP----IDNPAPIAELF---RQEHTGSTQSLYELSPCFRLGFMAANLA 91 
                  689*******************9988799999*******************9....66655665555...8999999********************* PP

         GRAS 102 Ileavege 109
                  Ilea+ ++
  PCP041305.1  92 ILEATMTD 99 
                  ****9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    
MEAATAISDG KSEAAMEILT RMNSTQVANP RPSSEQRLLE FMGLALKSRV NPIDNPAPIA  60
ELFRQEHTGS TQSLYELSPC FRLGFMAANL AILEATMTDQ SATSKARCRE DHHRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.15e-26GRAS family protein