PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP041334.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

HB-other

Protein Properties

Length: 70aa MW: 8167.29 Da PI: 6.2269

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP041334.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.6	9.1e-08	3	31	27	55
HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 27 aeereeLAkklgLterqVkvWFqNrRake 55 ++++ LA+++gL+++q+ +WF N+R ++ PCP041334.1 3 ESQKLALAESTGLDQKQINNWFINQRKRH 31 678889********************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 70 aa Download sequence
MQESQKLALA ESTGLDQKQI NNWFINQRKR HWKPTEDMQF VVMDASHPGH YYMDSVMGNP 60 FPMDVSPTLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	1e-38	TALE family protein