PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP041379.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 323aa MW: 37129.8 Da PI: 9.569

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP041379.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.5	6.5e-18	24	71	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll++ v+++G g+W+++ar g++R +k+c++rw +yl PCP041379.1 24 KGPWTAEEDGLLIEHVRLHGEGRWNSVARLAGLKRNGKSCRLRWVNYL 71 79********************************************97 PP
2	Myb_DNA-binding	51.5	2.4e-16	77	121	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T+ E+ +++d+++++G++ W+tIar ++ gRt++++k++w+++ PCP041379.1 77 RGHITPHEESIILDLHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 121 6778****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MYLGMMAGGH HRGWGMIEDE AWRKGPWTAE EDGLLIEHVR LHGEGRWNSV ARLAGLKRNG 60 KSCRLRWVNY LRPELKRGHI TPHEESIILD LHARWGNRWS TIARSLPGRT DNEIKNYWRT 120 HFKKKAKAPS DASERAKTRL LRRHKPHNQQ QQQQNLQVDQ ELKRIMSLLD ENETKLPLYW 180 PHAADHHQEQ GFFYSMLDGN IVNVSMPEAA SSNEVNFLWD GIVWYANGTG QDRTERNGAG 240 AKMPLDGNKE EEEGDGEVII LCSTDVERVV PGGEVERKFT QNSSRGTARS TRFRRTKRET 300 ERLVSLCSVP SHVPNGTLFI VNQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24310.1	1e-77	MYB family protein