PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP041388.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 239aa    MW: 27444.2 Da    PI: 7.8932
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP041388.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.81.4e-1171121255
                  HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  ++ h + E  RR++iN+ ++ Lr+llP +   ++kK s   +  ++ +YI +Lq
  PCP041388.1  71 KKLHTASEHDRRKKINNLYSSLRSLLPAD---QAKKRSIPNTISLVLKYILELQ 121
                  677**************************...*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MLALPHLFST IGLSVDQDHL NHEYSSYFCS DQTADSFLHV LPSHQPRVEL DRSTTSTPLR  60
GEDSSVSPMA KKLHTASEHD RRKKINNLYS SLRSLLPADQ AKKRSIPNTI SLVLKYILEL  120
QKQVEALIRR REELLSRASK EDDMHEEKKI KRTARSSLSA DSIYRLNDRE VAIQISTFKI  180
HINLLSEILQ HLEEEGLQVK NASSLESYGG RVFYNLHLDQ VEGTYRLEFE NLSKKLMSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.15e-43bHLH family protein