PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP041465.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family HB-other
Protein Properties Length: 253aa    MW: 28083.2 Da    PI: 8.2461
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP041465.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.52.6e-092293057
                 HHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
     Homeobox 30 reeLAkklgLterqVkvWFqNrRakekk 57
                 + +LA++l+L+e+q++ WF+ rR k+k+
  PCP041465.1  2 KSQLAEQLRLSEKQISGWFCHRRLKDKR 29
                 579***********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MKSQLAEQLR LSEKQISGWF CHRRLKDKRL LRDETQANGR QDRSSVVIQD RASGLGQDSC  60
GSTKHGEHRF VDPREVESRR LSGHDFTAAD ITREYRSHYT ERIGDMDNTS SESSSSLQDR  120
LLTRKEDPYD AETSRYRTHA KGMENMGYKP SGFLKVKGEA ENAAITAVKR QLGRQYWEDG  180
PLLGVEFDLL PPGAFESPII GSSHEPSTIG NTVLRSPDIS GVKGQLSPST VSGPNAFSLH  240
FDRSGVGKGV TTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G03250.14e-55HB-other family protein