PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP041655.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 235aa    MW: 27120.5 Da    PI: 6.9993
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP041655.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.60.0002107130123
                  EEETTTTEEESSHHHHHHHHHH.T CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                  ++C++C+ksF+  + L +H  + H
  PCP041655.1 107 WQCGYCKKSFRAEMFLDQHFDNrH 130
                  58***********99999976655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MKKTNLCVSI LLFLSFSILQ VSSLTQTNQD FEKSESSRTL EQGQEHAHEV HCSRDRSRAA  60
WQIIEKYLMP FVEHEHYEIP SNCRLHPDND LFRDQEEHKI HLDINEWQCG YCKKSFRAEM  120
FLDQHFDNRH YNLLNVSGSK CLADLCGALH CNAVMNTKSS KTKCNPAAVA RNHHLCEGLA  180
NSCFPINQSP SARRLNETYK CILPGYVHTD FDAAPYFLSD SVFAPKRDEE RNPRA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63280.13e-86C2H2 family protein