PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP041809.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family YABBY
Protein Properties Length: 87aa    MW: 9707.25 Da    PI: 7.2706
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP041809.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY62.22.2e-191358449
        YABBY  4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvn 49
                 ++ se++Cyv+CnfCnt+lav +P +  + +vtv+CGhC++l  ++
  PCP041809.1 13 NQPSEHLCYVRCNFCNTVLAVGIPCKRFMDTVTVKCGHCSNLSFLS 58
                 5789************************************986554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 87 aa     Download sequence    
MNMEEKVTMD LINQPSEHLC YVRCNFCNTV LAVGIPCKRF MDTVTVKCGH CSNLSFLSTR  60
PPLQGQCLPD HPTSLTLQVN ITNYSAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69180.13e-29YABBY family protein