PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP041820.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 81aa    MW: 9366.51 Da    PI: 10.1092
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP041820.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY107.37.8e-34460359
                 -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY  3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
                 Dg++WrKYGqK+v+g+++prsYYrCts +C+v+k+ver ++dpk++++tYeg+Hnh+
  PCP041820.1  4 DGFRWRKYGQKVVQGNPYPRSYYRCTSLKCSVRKHVERVSDDPKAFITTYEGKHNHD 60
                 9*******************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 81 aa     Download sequence    
MTGDGFRWRK YGQKVVQGNP YPRSYYRCTS LKCSVRKHVE RVSDDPKAFI TTYEGKHNHD  60
MPLRNTNAGA SEKDTTTKEK P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37260.21e-32WRKY family protein