PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP041823.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 94aa    MW: 9832.04 Da    PI: 7.9472
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP041823.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.50.00091230523
                 TTTEEESSHHHHHHHHHHT CS
      zf-C2H2  5 dCgksFsrksnLkrHirtH 23
                 dCg+ Fsr++++ +H   +
  PCP041823.1 12 DCGTLFSRRDSFITHRAFC 30
                 9**************8765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    
MKTCGTREYK CDCGTLFSRR DSFITHRAFC DALAEESAKT QTLVIGPDGS MNPNSNPTPS  60
AKSGVVASPP PPPHTPSNTV VSPALSIQSS GNPI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66730.14e-22C2H2 family protein