PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP041917.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C3H
Protein Properties Length: 139aa    MW: 15699.3 Da    PI: 7.9057
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP041917.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH32.81.2e-105274527
                 --SGGGGTS--TTTTT-SS-SSS CS
      zf-CCCH  5 lCrffartGtCkyGdrCkFaHgp 27
                  C++f  tG C+yGd+Ck+ H++
  PCP041917.1 52 VCNRFVNTGSCPYGDSCKYLHPK 74
                 5********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MGKYFCDYCE KEFQDTPPSR RRHLQSGQHL RARAQWYASF KDPNHAYPTK GVCNRFVNTG  60
SCPYGDSCKY LHPKNNQQDT VLIDNNQSSS FQENQSVGGS SLPDVVVRDH TGTSWSNLPP  120
SLMPPPEGGH PRLPFVDWG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26749.11e-46C3H family protein