PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP042002.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 74aa    MW: 8487.17 Da    PI: 4.3557
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP042002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.69e-112667245
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     + ++++E+ l+++  ++ G + W++Ia +++ gRt++++  +w 
      PCP042002.1 26 LQFSQDEEALIIRMYNLVGER-WALIAGRIP-GRTAEEIEKYWT 67
                     579******************.*********.***********6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 74 aa     Download sequence    
MADSEHSSSD DTHSDSREKS TEKSELQFSQ DEEALIIRMY NLVGERWALI AGRIPGRTAE  60
EIEKYWTSTY STSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01380.18e-19MYB_related family protein