PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP042051.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 139aa    MW: 16398.7 Da    PI: 6.0022
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP042051.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM36.12e-112874148
          NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48
                 lppG+rF  td+el+ +yL +k  +++l++ + + +v+iy+++P++L 
  PCP042051.1 28 LPPGYRFVLTDDELILHYLMRKFMNEQLPI-NRFLNVNIYQHHPRELT 74
                 79****************************.67999***********7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MEENNQFNNN MVPVLNEVGS VDAHIDSLPP GYRFVLTDDE LILHYLMRKF MNEQLPINRF  60
LNVNIYQHHP RELTGIQREG TMTDWKMHEY KLTNETDPPK KIDGTDMKLN DCVLCKIYKF  120
SRSKTENKMN DTNCKEFAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.13e-10NAC family protein