PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP042408.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 106aa    MW: 12237.2 Da    PI: 8.7637
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP042408.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.51.6e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g WT+eEd +lv +++q+G g+W++ ++  g+ R++k+c++rw +yl
      PCP042408.1 14 KGIWTPEEDHILVTYIEQHGHGNWRALPKLAGLSRCGKSCRLRWTNYL 61
                     678*******************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    
MVRAPCCAKM GLKKGIWTPE EDHILVTYIE QHGHGNWRAL PKLAGLSRCG KSCRLRWTNY  60
LRPDIKRGNF SKEEEDEIIN LHQILGNRYV VVPFFCEFAL HVNANS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.11e-51MYB family protein