PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP042492.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 277aa    MW: 30604.3 Da    PI: 5.064
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP042492.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.40.000592272631354
                  HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
          HLH  13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                  R+++++    Lr ++P  +       ++ +++L +Av+Y+ksL
  PCP042492.1 227 RQKMKKMVRALRGIVPGgN------EMNTVAVLDEAVQYLKSL 263
                  79999999999****9955......8***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MNIGVNVKKY RAIKEVGKIL MSVGVIAYSH QMQVCQSDQQ FDPNKAALPF SNQVGNNYMH  60
IPVASGCGAV LPNDENHFKP FHGVEFQTSS ICPKNFIIFD QTDHRSQIMF NPEISHKITG  120
PAFNLCAAYI QDNLGLNEGN IDNREASSTL KEDSDDIDAL LSLEEEELED YDEEEVSTAR  180
TRGNYGSSFS DSCSSYGLKT KKEGLCSSLE KSTAIGSSSS CNSERKRQKM KKMVRALRGI  240
VPGGNEMNTV AVLDEAVQYL KSLKVELQKL GVENLND
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29950.12e-35bHLH family protein