PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP042774.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 208aa    MW: 23580.1 Da    PI: 8.795
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP042774.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.52.4e-32128186159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                  ldDg++WrKYGqK vk++ +prsYYrCt+++C+vkk+v+r ++d+++v++tYeg Hnh+
  PCP042774.1 128 LDDGFRWRKYGQKAVKNTLCPRSYYRCTHNTCSVKKQVQRLSNDTSIVVTTYEGVHNHP 186
                  59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MENQYYPSPA AATSSSSPTY QFPPQNNLFT PSSSSLSINL FDNPHPPPDP HHHQVQIPPD  60
IDWISLLSGD QPAGDLLTTH NNHDQAGDRA EEIRGSNRRK GGASSRNYTR RSSRPRVAFH  120
TRSTDDILDD GFRWRKYGQK AVKNTLCPRS YYRCTHNTCS VKKQVQRLSN DTSIVVTTYE  180
GVHNHPSEEL METLTPLLKQ MQFLSARF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41570.12e-52WRKY family protein