PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP042779.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GATA
Protein Properties Length: 126aa    MW: 14103.5 Da    PI: 10.4472
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP042779.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA29.11.4e-092242122
         GATA  1 CsnCgttkTplWRrgpdgnktL 22
                 C+ C++t+TplWR+gp g+k L
  PCP042779.1 22 CTDCKATETPLWRSGPAGPK-L 42
                 ******************98.5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    
MNLRRKVIQD MNVKNVKNKK CCTDCKATET PLWRSGPAGP KLNEQKPSHC AMPVGSDTER  60
KFLLGGRTDL SESLQVKLVA FGKDVCLQGT PPVQKKRRYQ KRRREMGEVE QAAVCLLAMS  120
SHSVFG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.14e-11GATA family protein