PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP043156.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 91aa    MW: 10779.3 Da    PI: 5.0992
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP043156.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM392.4e-12791286
          NAM  2 ppGfrFhPtdeelvveyLkkkvegkk...leleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkat 86
                 p  f F+Ptd+++++++L k + +++    + +e ++e d++++ ePw++ ++ +++++++ fF++ +k   tg r +r++ +g+Wk t
  PCP043156.1  7 PYAFCFQPTDQQIISFFLYKIAVKRQllpPPHDEYVHEEDLFDFkEPWEIWEE-YGGDQDLNFFCNLKK---TGLRIHRKIGEGTWKGT 91
                 67899**************9988888887666678*******9889****744.567899*****9877...799***********976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    
MAGPLVPYAF CFQPTDQQII SFFLYKIAVK RQLLPPPHDE YVHEEDLFDF KEPWEIWEEY  60
GGDQDLNFFC NLKKTGLRIH RKIGEGTWKG T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.11e-08NAC family protein