PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP043183.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GRAS
Protein Properties Length: 200aa    MW: 22258.2 Da    PI: 8.6239
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP043183.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS103.72.6e-32661813118
         GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                  +lL+ecA+avs++d +++++lL+ l+elasp+gd  q+la+yf++AL  + ++s+ ++yk+l++ ++++++ +++ +    f+e+sP+ +f+h++ N 
  PCP043183.1  66 RLLMECARAVSEKDSSKISHLLWMLNELASPYGDFEQKLASYFLQALFCKATDSGLRCYKTLSSVAEKSHSFDSARKLILKFQELSPWTTFGHVASNG 163
                  79************************************************************9999985554444445445***************** PP

         GRAS 101 aIleavegeervHiiDfd 118
                  aIlea+ege+++HiiD++
  PCP043183.1 164 AILEALEGETKLHIIDIS 181
                  ****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MDISLFSPNK EANFLQQYSN QIKINGLAAA IDMQSTNQQT QNSHTSTSRS SGSSEPCPAG  60
TKWASRLLME CARAVSEKDS SKISHLLWML NELASPYGDF EQKLASYFLQ ALFCKATDSG  120
LRCYKTLSSV AEKSHSFDSA RKLILKFQEL SPWTTFGHVA SNGAILEALE GETKLHIIDI  180
SNTLLHPMAY FVRSFGHKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.13e-53GRAS family protein