PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP043372.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 247aa    MW: 27579.6 Da    PI: 10.1441
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP043372.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM644.6e-20111362128
          NAM   2 ppGfrFhPtdeelvveyLkkk.vegkkleleevikevdiy.kvePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 
                  p G+rFhPtd+elv  yL+ + ++gk+l +  +i e +++ ++ Pw + +++ +    +++++fF + ++   +g+r++r + + g+W+ t +dk + 
  PCP043372.1  11 PLGCRFHPTDQELVASYLRVRaLAGKPLGI-PFIYEYNLFgQTPPWVIWENLGGnslLDQDLFFFYELRS---SGSRSKRqIEAGGTWSGTSSDKVLG 104
                  78****************988255566666.779999877267889996533332224567888888766...4778888455589*******99888 PP

          NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                    +g+++g k+ + + ++ ++  ++ dW+++ey+l
  PCP043372.1 105 L-DGNQIGEKRHFKYTNKGSE--NNGDWLLEEYSL 136
                  8.999**********944333..478*******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MRMPLGYWGA PLGCRFHPTD QELVASYLRV RALAGKPLGI PFIYEYNLFG QTPPWVIWEN  60
LGGNSLLDQD LFFFYELRSS GSRSKRQIEA GGTWSGTSSD KVLGLDGNQI GEKRHFKYTN  120
KGSENNGDWL LEEYSLLPSA VAGAKVVLSR LKRNPRSRCG IKMDSSVPTP EFNEKPPVKR  180
AGKQVVNEKP PVKRKRARTE ELNEKPSVKE EKKEVGSQTN TSASVVPPLL NYKTALVQAV  240
VLMKEIG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.15e-14NAC family protein