PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP043576.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NF-YB
Protein Properties Length: 125aa    MW: 13976.9 Da    PI: 7.4115
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP043576.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB175.36e-5527120194
        NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 
                  vreqdr+lPian+srimkk+lP n+ki+kdaketvqecvsefisfvtseas+kc rekrktingddllwa+atl fedy++plkvyl+kyre+ 
  PCP043576.1  27 VREQDRYLPIANISRIMKKALPPNGKIAKDAKETVQECVSEFISFVTSEASEKCLREKRKTINGDDLLWAMATLSFEDYIDPLKVYLTKYREVR 120
                  69******************************************************************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    
MAEAPVSPGG VSHESGGDGS GSPRSNVREQ DRYLPIANIS RIMKKALPPN GKIAKDAKET  60
VQECVSEFIS FVTSEASEKC LREKRKTING DDLLWAMATL SFEDYIDPLK VYLTKYREVR  120
IQYIH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37060.15e-65NF-YB family protein