PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP043871.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family FAR1
Protein Properties Length: 143aa    MW: 16530.8 Da    PI: 5.3817
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP043871.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR139.61.7e-1261130271
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkke 71 
                  fY++YA  +GF +  ++skks++ +  ++r+fvC k+gk++ + +++ +++ +r+e   + kakl+  k 
  PCP043871.1  61 FYKNYALAAGFGIWEHNSKKSSDGDYLVRREFVCCKQGKKKVDANSKPNRKCRRVEVGSDWKAKLVPYKG 130
                  9******************************************999777777888888888888775554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MNYSSMEDEL EIEEIIKEKA DEGARDQFGA GMVELVVPTV DDELKSILKM KFDSLDEWYI  60
FYKNYALAAG FGIWEHNSKK SSDGDYLVRR EFVCCKQGKK KVDANSKPNR KCRRVEVGSD  120
WKAKLVPYKG IDNEKSVVTF FHE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22170.22e-06FAR1 family protein