PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP043879.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 230aa    MW: 25979.5 Da    PI: 9.6203
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP043879.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH361.3e-1183135155
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                  +++ h  +Er+RR+++ + ++ Lr+ lP       ++K s ++ + +A +YIk+Lq
  PCP043879.1  83 KKVIHRDIERQRRQEMGTLYASLRSQLPLeY---LKGKRSISDHVHQAGNYIKHLQ 135
                  57789************************77...9********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MDYIPSNILQ FDQASQHADD LFQVSTFSYI ESTIQDNQAL PPTLSQDGRN LTWRPSSGRG  60
KRKASSSSIS FSEIDDKKPK GNKKVIHRDI ERQRRQEMGT LYASLRSQLP LEYLKGKRSI  120
SDHVHQAGNY IKHLQNNVQE LHNKRNQLKR SCNILCSAGT KNTQCKMQHS VIIVRPCRVG  180
MEVVVNTPLK QGLPLSRVLE ILVGEGLSTV SCISTEVNER SIYTTESEVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.12e-42bHLH family protein