PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP043938.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB_related

Protein Properties

Length: 674aa MW: 75211.4 Da PI: 9.7558

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP043938.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.3	1.2e-10	18	69	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT......TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg......kgRtlkqcksrwqkyl 48 W t+E++ll++av+++G+ +W+++a ++ +t+ ck ++++++ PCP043938.1 18 TWGTWEELLLACAVHRFGTQSWDSVATELRkrssnlHLLTPHACKRKFHDLR 69 7*****************************9999997799999999999875 PP

Sequence ? help Back to Top
Protein Sequence Length: 674 aa Download sequence
MIFLMDKPAN FSQKQTPTWG TWEELLLACA VHRFGTQSWD SVATELRKRS SNLHLLTPHA 60 CKRKFHDLRR RFNDAVSAAS DDDKSPILWL DQLRQRRLDE LRLELQRYDR SIVSLQSKVE 120 RLKEVREQSL RETEKPVEKS DLEKTQEAEI KPADVLPEKK DISVRDGRSF DESKTTDPKP 180 EEPGTGDADT GNGSEPDEPG EAAGEEIGTA DKSSNPAVED SCNGSSDSVA KEPAVMESKK 240 GNSRELRESV AESKGGEEGT KESRQSSSDV QSSASLSRKA GEEPEPVGPE EHGEPDQEDQ 300 SPAMKGVPVE SQPLVDFLEI LRSLKFASFF ERRLHSQDYT KMIRQHVDFE MVQTRLEGGW 360 YSRCSRSLFF RDMLLICNNA IVFFGKKSPE YKAACELRSL VSKEMACLPP KQEPPPKEET 420 PTQPAPPVNP EPETSDSLLA KSKLSLPHNA CRKRSSITAR ASTSSSGPER RKEQASTFRD 480 VKPAINWKQK EESSDEIEKL HVTKRRRKER RRSSTRNNMT KNVRTRSNTN NERNSDVNEN 540 SESKAEMEKK SRVLSSNENS ESKAETEKKS NNNAGGKKQS AANFLSRIKS SSSKTVSLLE 600 ASKTPENNSK GGRAEQRKNG NGKGNTQKDQ GSRRGSGGRQ AAKEQDSPSK RNVGRPSKRA 660 AATTAGPAKR ARGR

Sequence ? help Back to Top

Protein Sequence Length: 674 aa Download sequence

MIFLMDKPAN FSQKQTPTWG TWEELLLACA VHRFGTQSWD SVATELRKRS SNLHLLTPHA  60
CKRKFHDLRR RFNDAVSAAS DDDKSPILWL DQLRQRRLDE LRLELQRYDR SIVSLQSKVE  120
RLKEVREQSL RETEKPVEKS DLEKTQEAEI KPADVLPEKK DISVRDGRSF DESKTTDPKP  180
EEPGTGDADT GNGSEPDEPG EAAGEEIGTA DKSSNPAVED SCNGSSDSVA KEPAVMESKK  240
GNSRELRESV AESKGGEEGT KESRQSSSDV QSSASLSRKA GEEPEPVGPE EHGEPDQEDQ  300
SPAMKGVPVE SQPLVDFLEI LRSLKFASFF ERRLHSQDYT KMIRQHVDFE MVQTRLEGGW  360
YSRCSRSLFF RDMLLICNNA IVFFGKKSPE YKAACELRSL VSKEMACLPP KQEPPPKEET  420
PTQPAPPVNP EPETSDSLLA KSKLSLPHNA CRKRSSITAR ASTSSSGPER RKEQASTFRD  480
VKPAINWKQK EESSDEIEKL HVTKRRRKER RRSSTRNNMT KNVRTRSNTN NERNSDVNEN  540
SESKAEMEKK SRVLSSNENS ESKAETEKKS NNNAGGKKQS AANFLSRIKS SSSKTVSLLE  600
ASKTPENNSK GGRAEQRKNG NGKGNTQKDQ GSRRGSGGRQ AAKEQDSPSK RNVGRPSKRA  660
AATTAGPAKR ARGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57980.1	1e-57	MYB_related family protein