PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP044008.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

LBD

Protein Properties

Length: 104aa MW: 11624 Da PI: 5.7984

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP044008.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	40.4	8.4e-13	1	55	46	100
DUF260 46 lkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +++lp + re+a++s++y A r +dP+yG+v++i++lq+++ ++++el +++ + PCP044008.1 1 MQQLPVHLREAAADSMFYGASLRFEDPIYGCVRIISQLQHHILEAQSELLKTNGQ 55 689999******************************************9888766 PP

Sequence ? help Back to Top
Protein Sequence Length: 104 aa Download sequence
MQQLPVHLRE AAADSMFYGA SLRFEDPIYG CVRIISQLQH HILEAQSELL KTNGQIASNI 60 AQHQLQQQQN AVLGVSYHHD QQISEPSGLS SDMQAIANDC YLHP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26660.1	2e-12	LBD family protein