PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP044069.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 169aa    MW: 19646 Da    PI: 5.9306
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP044069.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.36.2e-12451248
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48
                      +WT++Ed++l ++v+++G g+W    +  +   ++R++k+c+ r ++yl
      PCP044069.1  4 RAWTQQEDDILRQYVEKHGDGQWQQ--SLCNcacLNRCRKSCRQRCLNYL 51
                     68*********************86..3333466**************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MRKRAWTQQE DDILRQYVEK HGDGQWQQSL CNCACLNRCR KSCRQRCLNY LKPNLKSGHF  60
TEDEIDLIHR LHTLLGNRQN CSMLLRTSSP PTESAIDSWK TMLHYADNVD GTPFSSLGLE  120
EDLFTNFWVE DIAQSTTVGM NSADEGLHMS GNFSFRENLW NLEEERTKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.13e-24MYB family protein