PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP044149.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

AP2

Protein Properties

Length: 581aa MW: 64413.8 Da PI: 6.7384

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP044149.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47	6.4e-15	306	355	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g PCP044149.1 306 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 355 9*************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 581 aa Download sequence
MGSMNSNNWL SFPLSPTNSS LPSQLHPSHS HQFSLGLVNE TMDNPFQNQE WNMINTQGSD 60 EAPKVADFLG VSKSENHSDL VAFNDIQAND SVSDYLFPIN NIVSVQNTVV DNSSNFDFQE 120 KSNSLQSLTL SMGSGKGSST CETSTDNTSI TTVEATPRRT LDTFGQRTSI YRGVTRRSRY 180 SGHSLLDFVS KAHIKAHFYP FSTLISNLRI SDNAFLGRYE AHLWDNSCRR EGQSRKGRQG 240 GYDKEDKAAR AYDLAALKYW GTSTTTNFPI SNYEKEVEEM KNMTRQEFVA AIRRKSSGFS 300 RGASMYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTEE EAAEAYDIAA IKFRGLNAVT 360 NFDMNRYDVK SILESNTLPI GGGAAKRLKE AQALESSRKR EEMMALGSTF HYAAAGAASP 420 STSAVRNLQA YSLLQPQSTF DQNVQQSQPL LTLQNHDISQ YTHHHDPSSY QNYIQTQLQL 480 HQTQQQYQPT QQFYNNYGLQ STHPALLQGL MDMGSSSVMD HNNGSSSGSY SAGEYLGNTG 540 IGLASNSTAN NGLGSAEELA LVKVDYDMPN GGGYGYFYNV E

Sequence ? help Back to Top

Protein Sequence Length: 581 aa Download sequence

MGSMNSNNWL SFPLSPTNSS LPSQLHPSHS HQFSLGLVNE TMDNPFQNQE WNMINTQGSD  60
EAPKVADFLG VSKSENHSDL VAFNDIQAND SVSDYLFPIN NIVSVQNTVV DNSSNFDFQE  120
KSNSLQSLTL SMGSGKGSST CETSTDNTSI TTVEATPRRT LDTFGQRTSI YRGVTRRSRY  180
SGHSLLDFVS KAHIKAHFYP FSTLISNLRI SDNAFLGRYE AHLWDNSCRR EGQSRKGRQG  240
GYDKEDKAAR AYDLAALKYW GTSTTTNFPI SNYEKEVEEM KNMTRQEFVA AIRRKSSGFS  300
RGASMYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTEE EAAEAYDIAA IKFRGLNAVT  360
NFDMNRYDVK SILESNTLPI GGGAAKRLKE AQALESSRKR EEMMALGSTF HYAAAGAASP  420
STSAVRNLQA YSLLQPQSTF DQNVQQSQPL LTLQNHDISQ YTHHHDPSSY QNYIQTQLQL  480
HQTQQQYQPT QQFYNNYGLQ STHPALLQGL MDMGSSSVMD HNNGSSSGSY SAGEYLGNTG  540
IGLASNSTAN NGLGSAEELA LVKVDYDMPN GGGYGYFYNV E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	0.0	AP2 family protein