PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP044300.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family FAR1
Protein Properties Length: 255aa    MW: 29371.9 Da    PI: 9.8687
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP044300.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR197.91.1e-3042129290
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                  fY++YA++vGF +r+++ ++s r+g++++r++vC+keg+r+++ k+ +++r++ra tr gCka+++vkk+k+gkw vt++ +eHnH+l+
  PCP044300.1  42 FYDAYATQVGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFRKTRAKR-TENRKPRAITREGCKAMIVVKKDKSGKWIVTRFIKEHNHPLV 129
                  9*******************************************99.9***************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MSKDEDVLES SNGKEAVTYE GNSDTEPFVG MEFESEEAAK VFYDAYATQV GFIMRVDAFR  60
RSMRDGKVVW RRLVCNKEGF RKTRAKRTEN RKPRAITREG CKAMIVVKKD KSGKWIVTRF  120
IKEHNHPLVG TPANGRRSML LSQTPVILTF NLKLRTCLIT ILFLVLIFCA IYGGEVLVGE  180
REAEIKKGEG RRDEKDLKIR ELTAELQRER KRSATYQEQL DMVLREMEEH SNHLSRNIDG  240
IVQSVKEIES KRVAP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.12e-87FAR1 family protein