PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP044395.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

GeBP

Protein Properties

Length: 393aa MW: 43960.6 Da PI: 5.2138

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP044395.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	74.8	1.5e-23	153	247	3	97
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 +r+w+e De+++LqGl+d++++ g s +d+ fy ++ +s ++ksql+eK+rrL+kKf+ +++ ++g s ++hd+ ++ls k+W PCP044395.1 153 YHRVWTEPDELLFLQGLLDCASHGGFSFPKDLPLFYARFSATVSHFYTKSQLSEKLRRLRKKFRVVSSRLARGLCESQLSPHDRALYDLSGKLWS 247 68********************************************************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MYFTSGNADQ SVHLVAGEGL EAYLPLADMI DITAEIQRLS KRLSKMQAEY DGLKARLSSP 60 KFVEKAPEDI VRGVQEKAAE TEEKITLTKN RLALLESNVL LPIKRKNPDP INPNTNLFSP 120 QLLSDFNDVV LVPIPPDSYA QTLSTARTPP FKYHRVWTEP DELLFLQGLL DCASHGGFSF 180 PKDLPLFYAR FSATVSHFYT KSQLSEKLRR LRKKFRVVSS RLARGLCESQ LSPHDRALYD 240 LSGKLWSPEC WSTSPFGNRE KSDAGESDNL AAADENQNQN KNQSVSDDLD VENDCGDEVK 300 TTSELARPIA ALAAKSVLDV FDQSLNEVRM LLVQQGVLCS DPVRLASGSG SGSSNEGKTP 360 MDFERQWQLQ RLAELDVLAQ RLRLVLEDSN RWQ

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MYFTSGNADQ SVHLVAGEGL EAYLPLADMI DITAEIQRLS KRLSKMQAEY DGLKARLSSP  60
KFVEKAPEDI VRGVQEKAAE TEEKITLTKN RLALLESNVL LPIKRKNPDP INPNTNLFSP  120
QLLSDFNDVV LVPIPPDSYA QTLSTARTPP FKYHRVWTEP DELLFLQGLL DCASHGGFSF  180
PKDLPLFYAR FSATVSHFYT KSQLSEKLRR LRKKFRVVSS RLARGLCESQ LSPHDRALYD  240
LSGKLWSPEC WSTSPFGNRE KSDAGESDNL AAADENQNQN KNQSVSDDLD VENDCGDEVK  300
TTSELARPIA ALAAKSVLDV FDQSLNEVRM LLVQQGVLCS DPVRLASGSG SGSSNEGKTP  360
MDFERQWQLQ RLAELDVLAQ RLRLVLEDSN RWQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	1e-07	GeBP family protein