PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP044428.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family BBR-BPC
Protein Properties Length: 290aa    MW: 31994.9 Da    PI: 10.0581
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP044428.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind342.41.1e-104122901301
    GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd.........maflqrdkalaernkalverdnkllall 85 
                  mddd+ + rn+gyyep+  +k +l+lqlmss+aerd k+    r+  + + + ++a+++rd         m++ +r++++++        ++k+l+++
  PCP044428.1  12 MDDDALNMRNWGYYEPS--FKGHLSLQLMSSMAERDIKPfapgRDPAV-MVSANGAYHPRDcvvsdtqlpMNY-MRESWVNQ--------RDKFLNMM 97 
                  9***9999*******99..********************9*9999998.999*********999999999999.88889888........7899**99 PP

    GAGA_bind  86 lvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesa 183
                  +       a+p++  vl++t+ ++slq      l+++ +   e+         e++ + ke  ++kkrq +  pk++k kk++k    +k++ +++s+
  PCP044428.1  98 P-------ANPNYAAVLPETSGAHSLQI-----LQPPEASRDERVGRM-----EEPVVPKEGGTSKKRQGGGAPKAPKVKKPRK----PKDN-ANPSV 173
                  9.......468899**********9999.....555554422322222.....2344556666677777778888888888777....3233.44443 PP

    GAGA_bind 184 derskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsn 281
                   +r+k  kks+d+v+ng+++D+s++P+PvCsCtGa++qCY+WG+GGWqSaCCtt++S+yPLP+stkrrgaRiagrKmSqgafkk+LekLaaeGy+++n
  PCP044428.1 174 -PRVKPAKKSLDVVINGINMDISGIPIPVCSCTGAPQQCYRWGCGGWQSACCTTNVSMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFAN 270
                  .79*********************************************************************************************** PP

    GAGA_bind 282 pvDLkdhWAkHGtnkfvtir 301
                  p+DL++hWAkHGtnkfvt+r
  PCP044428.1 271 PIDLRSHWAKHGTNKFVTLR 290
                  ******************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MFVCLAESVA LMDDDALNMR NWGYYEPSFK GHLSLQLMSS MAERDIKPFA PGRDPAVMVS  60
ANGAYHPRDC VVSDTQLPMN YMRESWVNQR DKFLNMMPAN PNYAAVLPET SGAHSLQILQ  120
PPEASRDERV GRMEEPVVPK EGGTSKKRQG GGAPKAPKVK KPRKPKDNAN PSVPRVKPAK  180
KSLDVVINGI NMDISGIPIP VCSCTGAPQQ CYRWGCGGWQ SACCTTNVSM YPLPMSTKRR  240
GARIAGRKMS QGAFKKVLEK LAAEGYNFAN PIDLRSHWAK HGTNKFVTLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.11e-114BBR-BPC family protein