PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP044498.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

ARR-B

Protein Properties

Length: 585aa MW: 65435.5 Da PI: 6.7225

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP044498.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	79.2	4.8e-25	316	371	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ.kYRla 56 k +++Wt+eLH++Fv+aveqL G ++A+P++il+lmk +gLt+++v+SHLQ kYR++ PCP044498.1 316 KMKVDWTSELHKKFVQAVEQL-GVDQAIPSRILDLMKTEGLTRHNVASHLQqKYRMH 371 5689***************.************************54986 PP
2	Myb_DNA-binding	37.2	6.7e-12	319	366	2	46
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqk 46 WT e+++++v+av+qlG + +++I m +g+t+ ++ s++q+ PCP044498.1 319 VDWTSELHKKFVQAVEQLGVDqaIPSRILDLMKtEGLTRHNVASHLQQ 366 57********************************************96 PP
3	Response_reg	31.4	9.6e-12	20	126	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTT.SEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTE CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempg.mdGlellkeireeepklpiivvtahgeeedalealkaGa 94 vl+ d + + ++ +r+ le +y +v+++ + eal + + +++ ++ ++ + G+++l++ +e lpii+ + +++ +++ +Ga PCP044498.1 20 VLLLDGDTTSASQIRSKLEAMDY-IVTAFCNENEALSAFSSNPesFHVAIIEVNANNgHWGFQFLETAKE----LPIIMTSNIHCLSTMMKCIALGA 111 78889999999**********.***********777777******9989999998766....77888887777********** PP SEEEESS--HHHHHH CS Response_reg 95 kdflsKpfdpeelvk 109 +fl Kp ++++l++ PCP044498.1 112 VEFLRKPLSEDKLRN 126 **********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 585 aa Download sequence
MVCTANDLQE WKDFPKGLRV LLLDGDTTSA SQIRSKLEAM DYIVTAFCNE NEALSAFSSN 60 PESFHVAIIE VNANNGHWGF QFLETAKELP IIMTSNIHCL STMMKCIALG AVEFLRKPLS 120 EDKLRNIWQH VVHKAFNAGG SVISETLKPV KESLVSMVQP KQENEEQNCK ISKETENVLR 180 VHENDQEQSA GCDKYPAPST PQLKQVSRLL DHGDCQDQIN CLSEKESGEH DIETKSVETT 240 CNKPIDEGNL LTREPHHMLR KTAVKKENNS GDGSKSEVDM SCHPDNIDSG NDNGGAAENL 300 SKASVPNSSC KSNRKKMKVD WTSELHKKFV QAVEQLGVDQ AIPSRILDLM KTEGLTRHNV 360 ASHLQQKYRM HKRHILPKEE GRRLLQPHHS RDPIHQRSYY PYSHRPIMAF PPYHYTNPTQ 420 AMPPAYPMWG SQPPASSHPA TVQMWGQPGY PHSQWQPSDQ SWQYWNPYPG VMHCSSSSQL 480 QADAWGCPVM PPEQGGYSSY PQNTSGFQNA GGHAVENSHG YSMPQNSFDI HPAEEVVDKV 540 VKEAMSKPWL PLPLGLKPPS TEGVLAELTR QGICNIPQIN GSNTR

Sequence ? help Back to Top

Protein Sequence Length: 585 aa Download sequence

MVCTANDLQE WKDFPKGLRV LLLDGDTTSA SQIRSKLEAM DYIVTAFCNE NEALSAFSSN  60
PESFHVAIIE VNANNGHWGF QFLETAKELP IIMTSNIHCL STMMKCIALG AVEFLRKPLS  120
EDKLRNIWQH VVHKAFNAGG SVISETLKPV KESLVSMVQP KQENEEQNCK ISKETENVLR  180
VHENDQEQSA GCDKYPAPST PQLKQVSRLL DHGDCQDQIN CLSEKESGEH DIETKSVETT  240
CNKPIDEGNL LTREPHHMLR KTAVKKENNS GDGSKSEVDM SCHPDNIDSG NDNGGAAENL  300
SKASVPNSSC KSNRKKMKVD WTSELHKKFV QAVEQLGVDQ AIPSRILDLM KTEGLTRHNV  360
ASHLQQKYRM HKRHILPKEE GRRLLQPHHS RDPIHQRSYY PYSHRPIMAF PPYHYTNPTQ  420
AMPPAYPMWG SQPPASSHPA TVQMWGQPGY PHSQWQPSDQ SWQYWNPYPG VMHCSSSSQL  480
QADAWGCPVM PPEQGGYSSY PQNTSGFQNA GGHAVENSHG YSMPQNSFDI HPAEEVVDKV  540
VKEAMSKPWL PLPLGLKPPS TEGVLAELTR QGICNIPQIN GSNTR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	1e-137	ARR-B family protein