PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP044511.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 561aa MW: 61378.8 Da PI: 4.9984

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP044511.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.5	1e-12	506	551	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YI++L PCP044511.1 506 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAISYINEL 551 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 561 aa Download sequence
MTDYRIPPTM NLWTDDNASL MEAFMSSSDM ASFWAPPPAQ PTPQPAHAPL QPQSSASTSD 60 YPKAPVSAQF QPSATPFNQE TLMQRLQALI EGARESWTYA IFWQSSYDYS GASAGAVLGW 120 GEGFYKDERD KVKAKAKTTT SAAEQEYRKK VLRDLNSLIS GADTSADDAV VDQEVTDTEW 180 FFLVSMTQSF VNGSGIPGQA FFHSTPVWVA GPDRLAASAC ERARQGQVFG LQTMVCVPTA 240 NGVVELGSTE LIYQTSDLMN RVRFLFNFNN LEVGSWPMAA AADQGENDPS LWLNDPSTTT 300 VEVKDPVNAS APTSTSNQPI SKPIQFDNHP SSSSLSENPS PVQVPQLQQQ VQQQQTQSFF 360 PRELNFSDYN GYDRSSVKNS NSNSHSLKPE SGEILNFGES KRSSYSANGK LFSGHSQIAA 420 AEDNNSKKKR SPPSLGSNEE GILSFSSGVV LPSSGVAKSS GGADSDHSDL EASVVREADS 480 SRVVDPEKRP RKRGRKPANG REEPLNHVEA ERQRREKLNQ RFYALRAVVP NVSKMDKASL 540 LGDAISYINE LKLKLQMVET D

Sequence ? help Back to Top

Protein Sequence Length: 561 aa Download sequence

MTDYRIPPTM NLWTDDNASL MEAFMSSSDM ASFWAPPPAQ PTPQPAHAPL QPQSSASTSD  60
YPKAPVSAQF QPSATPFNQE TLMQRLQALI EGARESWTYA IFWQSSYDYS GASAGAVLGW  120
GEGFYKDERD KVKAKAKTTT SAAEQEYRKK VLRDLNSLIS GADTSADDAV VDQEVTDTEW  180
FFLVSMTQSF VNGSGIPGQA FFHSTPVWVA GPDRLAASAC ERARQGQVFG LQTMVCVPTA  240
NGVVELGSTE LIYQTSDLMN RVRFLFNFNN LEVGSWPMAA AADQGENDPS LWLNDPSTTT  300
VEVKDPVNAS APTSTSNQPI SKPIQFDNHP SSSSLSENPS PVQVPQLQQQ VQQQQTQSFF  360
PRELNFSDYN GYDRSSVKNS NSNSHSLKPE SGEILNFGES KRSSYSANGK LFSGHSQIAA  420
AEDNNSKKKR SPPSLGSNEE GILSFSSGVV LPSSGVAKSS GGADSDHSDL EASVVREADS  480
SRVVDPEKRP RKRGRKPANG REEPLNHVEA ERQRREKLNQ RFYALRAVVP NVSKMDKASL  540
LGDAISYINE LKLKLQMVET D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	488	496	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	1e-147	bHLH family protein