PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP044554.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 382aa MW: 43561.2 Da PI: 5.0175

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP044554.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	177.3	4.2e-55	8	137	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 +ppGfrFhPtdeelv +yL+kkv+++k++l +vi+++d+y++ePwdL++ ++e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+v++ PCP044554.1 8 VPPGFRFHPTDEELVGYYLRKKVASQKIDL-DVIRDIDLYRIEPWDLQErcrIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKSVYD- 103 69**************************.9***********953432233667**********************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 k +l+g++ktLvfykgrap+g+k+dW+mheyrle PCP044554.1 104 KAKLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 137 999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MESIESTVPP GFRFHPTDEE LVGYYLRKKV ASQKIDLDVI RDIDLYRIEP WDLQERCRIG 60 YEEQNEWYFF SHKDKKYPTG TRTNRATMAG FWKATGRDKS VYDKAKLIGM RKTLVFYKGR 120 APNGQKSDWI MHEYRLESDE NGPPQASDRN SSSSSSSSSS SSSLSTHTQT HTHTHTTLVK 180 FLQEEGWVVC RAFKKRTSSQ NKSIEGWDSS YFYEELNGLT SVADPTNYMI SRQPQSFLSQ 240 NFMCKQETEA DSLNFLHSDP FVQLPQLESP SLPLIKRPSS TSLISENNIE IEDQQSIRGC 300 NDAKKVTDWR ALDKFVASQL SQEERYEGDG EASFGANDES DMALLLLQSS SARDEDDQLG 360 NKLNGFLNST PDCDIGICIF EK

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MESIESTVPP GFRFHPTDEE LVGYYLRKKV ASQKIDLDVI RDIDLYRIEP WDLQERCRIG  60
YEEQNEWYFF SHKDKKYPTG TRTNRATMAG FWKATGRDKS VYDKAKLIGM RKTLVFYKGR  120
APNGQKSDWI MHEYRLESDE NGPPQASDRN SSSSSSSSSS SSSLSTHTQT HTHTHTTLVK  180
FLQEEGWVVC RAFKKRTSSQ NKSIEGWDSS YFYEELNGLT SVADPTNYMI SRQPQSFLSQ  240
NFMCKQETEA DSLNFLHSDP FVQLPQLESP SLPLIKRPSS TSLISENNIE IEDQQSIRGC  300
NDAKKVTDWR ALDKFVASQL SQEERYEGDG EASFGANDES DMALLLLQSS SARDEDDQLG  360
NKLNGFLNST PDCDIGICIF EK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18060.1	1e-142	NAC family protein