PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP044694.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Dof

Protein Properties

Length: 248aa MW: 26308.9 Da PI: 6.3825

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP044694.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.1	2.2e-39	29	89	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++ l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWt+GG+lrnvPvGgg+rkn k+s PCP044694.1 29 QTEPLHCPRCDSDNTKFCYYNNYNLAQPRHFCKSCRRYWTHGGTLRNVPVGGGSRKNTKRS 89 57889****************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MPFDSADEQM RPSMTTRVQH SLGHPPPQQT EPLHCPRCDS DNTKFCYYNN YNLAQPRHFC 60 KSCRRYWTHG GTLRNVPVGG GSRKNTKRSR PSCSSSSGSP SSSSLTQEVS SVASAKPNSF 120 PVEPKPETAT DHEKLMDLNE SAVGNGGFTS LLSAQGPPAP GFLAFSGFGY GLGLGQGFDE 180 VGTYGYDGGR GVLAFPDVGD FGNVIHNNGA VSGGSVGCNT WQIMTGGDGG IAENNGDCFA 240 WPELETSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66940.1	5e-33	Dof family protein