PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP044716.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 344aa    MW: 38187.5 Da    PI: 8.4629
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP044716.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.23.8e-1048117153
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...................TTS-STCHHHHHHHHHHHHH CS
          HLH   1 rrrahnerErrRRdriNsafeeLrellPk.as................kapskKlsKaeiLekAveYIks 53 
                  r++ +  rE+ RRdr+N+ f+eL   l + a                  ++ +K++Ka+iL+ +++ +k+
  PCP044716.1  48 RKVQKADREKLRRDRLNEHFFELGNTLVHgARalilnkhgrpcyvgnaDPDRPKNDKATILTDTIQMLKD 117
                  5677889**********************888***************8788888***********99885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MDHWKSDDFS AASVPSSTQP LPSSRPHNSN SDSRQRLDVE TKDPIVARKV QKADREKLRR  60
DRLNEHFFEL GNTLVHGARA LILNKHGRPC YVGNADPDRP KNDKATILTD TIQMLKDFTS  120
DVNKLKAECS ALTDESRELM QEKNELREEK ASLKSDIENL NVQYQQRLRV MFPWAGMDPS  180
VVMAPPYSYP MRVAVPSGPI PMHPSLQSYP YFQAQNPAAM PNPCSTFVPY PAPANPPVQQ  240
PSPQYASVSH LSSKQDSRSR SSDHQRGSTA ERCDDSNDVA TDLELKMPGS STPQDSSSAV  300
KKAKQSQRKD RSVTDGCSSS RHSISQVVQD SSSNSVGDVP KPNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.16e-79bHLH family protein