PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP044735.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 412aa    MW: 45672.1 Da    PI: 5.0866
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP044735.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.10.000773614001054
                  HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  + R ++i++ ++ L++++P      ++  + + +L +A++Y+ksL
  PCP044735.1 361 KMRKEKIRETINILQKIIPDG----KG-KDAMVVLDEAIHYLKSL 400
                  78999**************97....23.46699**********99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    
MVCQAASQTR FRALKHENGI DGSATIIVRV IACFQPLQDC QFLEVYIFVI GLVGGCFGWM  60
GENFGTWIRQ QHLGWQPPDP NAIGAPLGLG QQNFVSAYGK LGTNTMPPYA SSELPHPQVG  120
RPNEPHGSFY GLPRIRQAFM PATDNGLKDR VSSAHHGIPG ETFVPNADSA FEQKRLLVNN  180
PCGDQATLIF SSGIVNPMRC RTSWNPFQQG AYYLEGDDPR NDRDFKNLSG AVLTDEFKGK  240
DENGAESEMH EDTEELNALL YSDGDSDYTE DDEVTSTGHS PSTMTVHDKQ NWFEEVASSD  300
GMNKKRKLFD EGYDHVPSIM DTASSMKHNR PLELEDDAES SCACNRSSGL REVDSFTSNK  360
KMRKEKIRET INILQKIIPD GKGKDAMVVL DEAIHYLKSL KLKAKALGLD SL