PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP044770.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

SRS

Protein Properties

Length: 229aa MW: 25608.6 Da PI: 9.1205

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP044770.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	185.4	2.2e-57	15	158	5	153
DUF702 5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrer.qqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkele 101 +++CqdCGnq+kk+C+++RCRtCCks+gf+C+th kstWvp+++rr+ +qql ++ ++ ++ ++ ++ ++r+ +a+ + ++ ++s + + PCP044770.1 15 GSRCQDCGNQSKKECVYMRCRTCCKSKGFHCQTHFKSTWVPVYRRRHAhHQQLPSTDPQHPTHLHQGHNYNPRR------TAAGHVIINPSSSGTWQN 106 679*****************************************9734555555555555556555555554......566666666777778889 PP DUF702 102 tsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153 ++++P+ev+s+a frcvrv+s++d ++ aYqt++ igGhvfkGiLydqG++ PCP044770.1 107 VNNFPAEVNSMANFRCVRVRSMEDTVNQQAYQTSMVIGGHVFKGILYDQGPD 158 99**********************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 229 aa Download sequence
MVRQGRGGRE EEIMGSRCQD CGNQSKKECV YMRCRTCCKS KGFHCQTHFK STWVPVYRRR 60 HAHHQQLPST DPQHPTHLHQ GHNYNPRRTA AGHVIINPSS SGTWQNVNNF PAEVNSMANF 120 RCVRVRSMED TVNQQAYQTS MVIGGHVFKG ILYDQGPDYT TATGQSSSSQ HVMNKQTSNF 180 INAAASASNI TASTSSAAAD QEVPHHHQLP SSYPLIPFNA FMPGTQFFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G21400.1	4e-49	SRS family protein