PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP044804.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family M-type_MADS
Protein Properties Length: 103aa    MW: 12064.3 Da    PI: 11.1424
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP044804.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF94.74.2e-30959151
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
       SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                 krienk+ rqvtfskRr g+lKKA+E+SvLCdaevavi+fs+ gkl+eys+
  PCP044804.1  9 KRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVAVIVFSTVGKLFEYST 59
                 79***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 103 aa     Download sequence    
MGRGKVQMKR IENKISRQVT FSKRRSGLLK KAHEISVLCD AEVAVIVFST VGKLFEYSTD  60
FRSERYSSLL SIYFIWKKYM ALVHFTIRRR DKGLLTGQIM RVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60910.11e-34MIKC_MADS family protein