PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP044967.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GeBP
Protein Properties Length: 193aa    MW: 21362.9 Da    PI: 4.546
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP044967.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57365.21.5e-20671471898
       DUF573  18 Glidfkaktgkspsddidafyefvkksisfkvsksqlve....KirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 
                  G+i+fk+k+g+ + +++  f ef+kk ++++ s++qlve    KirrLKkK++  ++    g++p+fsk+h+ k+++l kkiWgs
  PCP044967.1  67 GIIEFKSKKGVAANSNMAPFLEFIKKDLQVDLSTDQLVEkltdKIRRLKKKYQAGED----GEDPVFSKPHELKCLDLWKKIWGS 147
                  9***********************************975222279*******87655....5*********************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MAPKKLVEDP PPAVVEYFDE ETVDEDEEEE DDAVEAEVSK AKSVDLNDDE LGGGRRGRKA  60
LCGCSEGIIE FKSKKGVAAN SNMAPFLEFI KKDLQVDLST DQLVEKLTDK IRRLKKKYQA  120
GEDGEDPVFS KPHELKCLDL WKKIWGSEGN GIDSNAKGGK RKPPRKNNKV NNDTVLALPI  180
SEVTEERGAE ECG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.12e-15GeBP family protein