PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP045074.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 250aa    MW: 27930.7 Da    PI: 9.613
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP045074.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.11.5e-08157197954
                  HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                   r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  PCP045074.1 157 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 197
                  699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MDIGQYKSEE QMEMMMMMQM EKISELCGAY NDVVSDLPQS DLNFSATTTS PTSLSATMSH  60
YTTDQNPHNN SIHSPNSNSQ SFLNLPRIPS TISFTNTNPT EQTLFSTPSQ KRASMAAMRE  120
MIFRIAAMQP INIDPESVKP PKRRNVKISK DPQSVAARHR RERISERIRI LQRLVPGGTK  180
MDTASMLDEA IHYVKFLKTQ VQTLERAATN RPTGIGFPVA MSSGSYISNS MAKAYQAPPS  240
HQNVQHFGDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.13e-42bHLH family protein