PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP045208.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB

Protein Properties

Length: 225aa MW: 25557.7 Da PI: 10.4577

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP045208.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	66.9	3.7e-21	29	76	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTteEd++l++a++ +G ++WktI+++ g++R++k+c++rw++yl PCP045208.1 29 KGAWTTEEDQKLAKAIETHGAKRWKTISSKAGLNRCGKSCRLRWLNYL 76 79********************************************97 PP
2	Myb_DNA-binding	51.8	1.9e-16	82	127	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E++l+v+++k+lG++ W++Ia +++ gRt++++k++w+++l PCP045208.1 82 RGNISDQEEDLIVRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 127 78999***************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MAPVTKESVN RRKMKGGEAM KNAKRKVNKG AWTTEEDQKL AKAIETHGAK RWKTISSKAG 60 LNRCGKSCRL RWLNYLRPNI KRGNISDQEE DLIVRLHKLL GNRWSLIAGR LPGRTDNEIK 120 NYWNSHLSKR MSQKEKENGA NLTRKMISTD HQKDHVQMKE DVSLQEAATS TSTTSASSSA 180 ASKGGDQNSN INIDVDDFFD FSNEGSLNLE WVSKFLEQDH GRWLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G40330.1	2e-52	MYB family protein