PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT24574.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 108aa    MW: 12274.1 Da    PI: 10.9362
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT24574.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP244.73.3e-142170255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr ++ +gr+ +eIrdp     +   +++lg+f+t  eA   ++a + +++g
  PHT24574.1 21 HYRGVRKRP-WGRYTVEIRDP-----HrkCQVWLGTFDTVVEAGMTYDATAIEFRG 70
                7********.**********6.....336**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 108 aa     Download sequence    
MARRHRRTTA ATATTVEKEV HYRGVRKRPW GRYTVEIRDP HRKCQVWLGT FDTVVEAGMT  60
YDATAIEFRG VKAKTNLPIP VDLTRSPSEV STIESSTAMT KVLVLSRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.15e-32ERF family protein