PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT24646.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GeBP
Protein Properties Length: 98aa    MW: 11498.4 Da    PI: 8.4575
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT24646.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57359.21.1e-182651073
      DUF573 10 eDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkak 73
                +D+++lL+G +++k++ g +p++d++ fyef+k++++++v ksql++K r L+kKf k v++ +
  PHT24646.1  2 DDQVALLRGKVKYKEQIGIEPKADMSTFYEFIKEKLQANVCKSQLSDKTRTLQKKFMKSVNDGE 65
                7*********************************************************999844 PP
Sequence ? help Back to Top
Protein Sequence    Length: 98 aa     Download sequence    
MDDQVALLRG KVKYKEQIGI EPKADMSTFY EFIKEKLQAN VCKSQLSDKT RTLQKKFMKS  60
VNDGEMMLDD KAKILEEKWK NLDDDKATLI LNHLDFIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.12e-12GeBP family protein