PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT24963.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YB
Protein Properties Length: 151aa    MW: 17254.8 Da    PI: 7.3436
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT24963.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB69.75.3e-221771793
       NF-YB 17 mkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93
                m+k+lP +a i +da + +q+ vs fi  +t +a++ c+ +k k ++++d++wa+ ++G+++y e l+ yl+kyr+ 
  PHT24963.1  1 MHKILPMHATINDDAVDAIQKIVSYFIHRITIKANEYCHMDKIKIVTAKDIIWAMNNVGLHNYGELLTHYLHKYRQE 77
                89*************************************************************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
MHKILPMHAT INDDAVDAIQ KIVSYFIHRI TIKANEYCHM DKIKIVTAKD IIWAMNNVGL  60
HNYGELLTHY LHKYRQENSM HYLRPNIMQS NAPSSLILSI NSVPMMSYGY PHFPPNVLLN  120
NPVAVVMTNV RKKNMVAEND EDLDSSESSS S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47670.23e-23NF-YB family protein