PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT25449.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 181aa MW: 19313.6 Da PI: 10.6478

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT25449.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	24.8	4.3e-08	149	177	31	59
T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 31 gCpvkkkversaedpkvveitYegeHnhe 59 + ++kk+ver+ +dp ++++tY++eH+h+ PHT25449.1 149 SATAKKHVERAMDDPMMLIMTYKEEHRHT 177 5689************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 181 aa Download sequence
MVGRTGHARL CRAPIQAVQA QAQAKVHVHD SLTSLSLSPY GYMEKERVLA PASLFIVAPV 60 AALVQTGLML GFRKPRVNVV VVAGASNGAR VGDMKWKDAF GSMKNGISSS FLSSATGEGS 120 RSISSVAILS SSMLLCLMVK AISAGKQPSA TAKKHVERAM DDPMMLIMTY KEEHRHTQVA 180 M

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31550.1	6e-10	WRKY family protein