PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT25545.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 190aa    MW: 20518.5 Da    PI: 4.8386
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT25545.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2285.4e-092411355
         AP2 13 grWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                gr++AeIrdp     +   +++ g+f+ta eA  a++aa+ +++g
  PHT25545.1  2 GRYAAEIRDP-----HrkCQVWFGTFDTAMEAGMAYDAAAVEFRG 41
                9********6.....336**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MGRYAAEIRD PHRKCQVWFG TFDTAMEAGM AYDAAAVEFR GVKEVSSFPP RLKIILMLVV  60
VVAVLIVVKC VILMDSDPXM TKVKKAEVPE ELVIVESSSL PLDLTLGRSL YCLGGKFFSS  120
QTQNNLDARG GGGGLDRGEM CHTNGFGSII MGSDAGDLSE SDSSSVVDFM GNDTKGIQID  180
LNFPPVPKKM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28370.19e-12ERF family protein