PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT25721.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 292aa    MW: 33642.3 Da    PI: 5.7264
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT25721.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B330.65.8e-102721994
                -HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
          B3 19 pkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94
                p  f++e++  k   kt  +++ +g  Wevk+  r +s+ ++ ++ W +F   + L+ gD+++F+l+++s+f  +v
  PHT25721.1  2 PGAFVKENK--KMLAKTALVKTNEGMLWEVKI-ARETSDYFICKGDWPRFEVHHMLELGDILIFYLIDKSTF--HV 72
                778999996..558889***************.4666666778888*********************98888..54 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MPGAFVKENK KMLAKTALVK TNEGMLWEVK IARETSDYFI CKGDWPRFEV HHMLELGDIL  60
IFYLIDKSTF HVVPYSKKPC TNIRHLEDLS SSEEEEKNTE FGTSRGCKKV KTEPKALSDT  120
NFSKELHQSR IDRMSKAIKE IAFKKQQIQK PFEKGDEVEV ASQEDGLIGS YYTATIISPI  180
GSYLYRVKYK TLFSDDESVP LEDVVTASKV RPVPPDQRKI LSENNFRLYD VVDVFANDGW  240
WFGFINGIVG EELYVYFPTT ADNIAYPPDV LRLHQEWSNG KWIFPPEQGI FN